STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0H2RPM4DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes. (551 aa)    
Predicted Functional Partners:
A0A0H2R3M3
CPSF_A domain-containing protein.
    
 0.992
A0A0H2S0Q0
Cullin-domain-containing protein; Belongs to the cullin family.
    
 0.969
A0A0H2RLP6
RING/U-box.
    
 0.928
A0A0H2RSC7
Rad4-domain-containing protein.
   
 0.925
A0A0H2RS25
UV excision repair protein Rad23.
    
 0.916
A0A0H2RSE5
Mov34-domain-containing protein.
    
 0.909
A0A0H2S0U2
PCI domain-containing protein.
    
 0.905
A0A0H2REW8
Uncharacterized protein.
   
 0.903
A0A0H2S1Y9
SNF2 family DNA-dependent ATPase.
   
 0.903
A0A0H2SSS4
EF-hand.
   
 0.901
Your Current Organism:
Schizopora paradoxa
NCBI taxonomy Id: 27342
Other names: Hyphodontia paradoxa, S. paradoxa
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