A0A0H2RSN6 protein (Schizopora paradoxa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A0H2RSN6

Response regulatory domain-containing protein. (1101 aa)

Predicted Functional Partners:

A0A0H2RRB9

0.984

A0A0H2SC22

0.984

A0A0H2S204

0.983

A0A0H2R6R1

0.980

A0A0H2SBA6

0.975

A0A0H2R5B0

0.955

A0A0H2RAQ4

0.914

A0A0H2REI1

0.914

A0A0H2RCJ0

0.907

A0A0H2S5F4

0.907

Your Current Organism:

Schizopora paradoxa

NCBI taxonomy Id: 27342
Other names: Hyphodontia paradoxa, S. paradoxa

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0H2R5B0	A0A0H2RCJ0	Histidine kinase, phosphotransfer Hpt.	HSF_DOMAIN domain-containing protein.	0.955
A0A0H2R5B0	A0A0H2RSN6	Histidine kinase, phosphotransfer Hpt.	Response regulatory domain-containing protein.	0.955
A0A0H2R5B0	A0A0H2S5F4	Histidine kinase, phosphotransfer Hpt.	CheY-like protein.	0.955
A0A0H2R6R1	A0A0H2RCJ0	HSP20-like chaperone.	HSF_DOMAIN domain-containing protein.	0.980
A0A0H2R6R1	A0A0H2RSN6	HSP20-like chaperone.	Response regulatory domain-containing protein.	0.980
A0A0H2R6R1	A0A0H2S5F4	HSP20-like chaperone.	CheY-like protein.	0.980
A0A0H2RAQ4	A0A0H2RCJ0	14-3-3 protein; Belongs to the 14-3-3 family.	HSF_DOMAIN domain-containing protein.	0.914
A0A0H2RAQ4	A0A0H2REI1	14-3-3 protein; Belongs to the 14-3-3 family.	14-3-3 protein; Belongs to the 14-3-3 family.	0.783
A0A0H2RAQ4	A0A0H2RRB9	14-3-3 protein; Belongs to the 14-3-3 family.	Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.	0.861
A0A0H2RAQ4	A0A0H2RSN6	14-3-3 protein; Belongs to the 14-3-3 family.	Response regulatory domain-containing protein.	0.914
A0A0H2RAQ4	A0A0H2S204	14-3-3 protein; Belongs to the 14-3-3 family.	WD_REPEATS_REGION domain-containing protein.	0.725
A0A0H2RAQ4	A0A0H2S5F4	14-3-3 protein; Belongs to the 14-3-3 family.	CheY-like protein.	0.914
A0A0H2RAQ4	A0A0H2SBA6	14-3-3 protein; Belongs to the 14-3-3 family.	WD40 repeat-like protein.	0.682
A0A0H2RAQ4	A0A0H2SC22	14-3-3 protein; Belongs to the 14-3-3 family.	Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.	0.612
A0A0H2RCJ0	A0A0H2R5B0	HSF_DOMAIN domain-containing protein.	Histidine kinase, phosphotransfer Hpt.	0.955
A0A0H2RCJ0	A0A0H2R6R1	HSF_DOMAIN domain-containing protein.	HSP20-like chaperone.	0.980
A0A0H2RCJ0	A0A0H2RAQ4	HSF_DOMAIN domain-containing protein.	14-3-3 protein; Belongs to the 14-3-3 family.	0.914
A0A0H2RCJ0	A0A0H2REI1	HSF_DOMAIN domain-containing protein.	14-3-3 protein; Belongs to the 14-3-3 family.	0.914
A0A0H2RCJ0	A0A0H2RRB9	HSF_DOMAIN domain-containing protein.	Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.	0.984
A0A0H2RCJ0	A0A0H2RSN6	HSF_DOMAIN domain-containing protein.	Response regulatory domain-containing protein.	0.907