STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0H2RTN6Hemerythrin domain-containing protein. (216 aa)    
Predicted Functional Partners:
A0A0H2S9W6
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.757
A0A0H2RN78
RPB5 subunit of DNA-directed RNA polymerase.
    
  0.752
A0A0H2RSC1
Uncharacterized protein.
    
  0.752
A0A0H2SC48
RNA polymerase I.
    
  0.752
A0A0H2R3T9
RBP11-like subunits of RNA polymerase.
    
  0.751
A0A0H2RS46
RPOL4c domain-containing protein.
    
  0.751
A0A0H2SQT2
DNA-directed RNA polymerases n subunit superfamily.
    
  0.750
A0A0H2RB23
RBP11-like subunits of RNA polymerase.
    
  0.666
A0A0H2RMJ8
Uncharacterized protein.
    
  0.664
A0A0H2S1C7
RPOLD domain-containing protein.
    
  0.663
Your Current Organism:
Schizopora paradoxa
NCBI taxonomy Id: 27342
Other names: Hyphodontia paradoxa, S. paradoxa
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