STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0H2RWN3Lactamase_B domain-containing protein. (369 aa)    
Predicted Functional Partners:
A0A0H2RJH6
Endonuclease.
   
   0.867
A0A0H2S1V3
Lactamase_B domain-containing protein.
  
  
 
0.768
A0A0H2S7B1
Metallo-hydrolase/oxidoreductase.
  
  
 
0.742
A0A0H2SE98
Glucose-6-phosphate 1-epimerase; Catalyzes the interconversion between the alpha and beta anomers from at least three hexose 6-phosphate sugars (Glc6P, Gal6P, and Man6P).
    
   0.679
A0A0H2RW55
NAP-domain-containing protein; Belongs to the nucleosome assembly protein (NAP) family.
    
   0.665
TIF6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family.
    
   0.648
A0A0H2RID7
Exosome component 4.
  
 
 0.564
A0A0H2RVT1
Ribosomal protein S5 domain 2-like protein.
  
 
 0.564
A0A0H2RWY7
RNase_PH domain-containing protein.
  
 
 0.564
A0A0H2S767
Tr-type G domain-containing protein.
    
 
 0.520
Your Current Organism:
Schizopora paradoxa
NCBI taxonomy Id: 27342
Other names: Hyphodontia paradoxa, S. paradoxa
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