STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0H2S0Z3Uncharacterized protein. (292 aa)    
Predicted Functional Partners:
A0A0H2RID7
Exosome component 4.
 
 
 0.992
A0A0H2RWL4
Exosome complex exonuclease RRP40.
   
 0.990
A0A0H2RJQ5
Ribosomal protein S5 domain 2-like protein.
   
 0.989
A0A0H2SET2
EXOSC1 domain-containing protein.
   
 0.988
A0A0H2RWY7
RNase_PH domain-containing protein.
   
 0.986
A0A0H2RD09
Ribosomal protein S5 domain 2-like protein.
   
 0.985
A0A0H2RCW8
RNB-domain-containing protein; Belongs to the RNR ribonuclease family.
   
 0.983
A0A0H2RVT1
Ribosomal protein S5 domain 2-like protein.
   
 0.983
A0A0H2RSF0
Uncharacterized protein.
   
 0.981
A0A0H2SMC1
Antiviral helicase.
   
 0.974
Your Current Organism:
Schizopora paradoxa
NCBI taxonomy Id: 27342
Other names: Hyphodontia paradoxa, S. paradoxa
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