STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0H2S147Carboxymuconolactone decarboxylase. (192 aa)    
Predicted Functional Partners:
A0A0H2S5U0
Serine/threonine-protein kinase.
    
 0.680
A0A0H2RTJ6
Ras-domain-containing protein.
    
 0.668
A0A0H2S1P2
Uncharacterized protein.
    
 0.668
A0A0H2RRX6
Metallo-dependent phosphatase.
    
 
 0.663
A0A0H2RTC4
Metallo-dependent phosphatase.
    
 
 0.663
A0A0H2RZA5
Uncharacterized protein.
    
 
 0.663
A0A0H2RZA9
Serine/threonine-protein phosphatase.
    
 
 0.663
A0A0H2R1A8
Small GTPase-binding protein.
    
 0.621
A0A0H2R511
Uncharacterized protein.
    
 0.621
A0A0H2RBI3
GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family.
    
 0.621
Your Current Organism:
Schizopora paradoxa
NCBI taxonomy Id: 27342
Other names: Hyphodontia paradoxa, S. paradoxa
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