STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0H2S2N4Leuk-A4-hydro_C domain-containing protein. (670 aa)    
Predicted Functional Partners:
A0A0H2S5I6
IPPT-domain-containing protein.
 
      0.845
A0A0H2RFI0
Tryptophan synthase.
    
 0.760
A0A0H2S7U3
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
    
 0.679
A0A0H2S8Q4
60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.
    
  0.675
A0A0H2R2S6
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
   
 0.670
A0A0H2R153
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
    
 0.669
A0A0H2S995
Haloacid dehalogenase.
    
 0.669
A0A0H2SCA2
Phosphodiesterase.
     
 0.669
A0A0H2RXC4
KOW domain-containing protein.
    
  0.667
A0A0H2RBW0
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
    
 0.666
Your Current Organism:
Schizopora paradoxa
NCBI taxonomy Id: 27342
Other names: Hyphodontia paradoxa, S. paradoxa
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