STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0H2S7R5Clavaminate synthase-like protein. (344 aa)    
Predicted Functional Partners:
A0A0H2R9J7
Uncharacterized protein.
    
 0.876
A0A0H2RZL1
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
   
 0.873
A0A0H2SFJ8
Spindle pole body component.
    
 0.871
A0A0H2RZF9
Uncharacterized protein.
    
 0.865
A0A0H2S735
Spindle pole body component.
    
 0.865
A0A0H2SRN8
Spindle pole body component.
    
 0.865
A0A0H2S2I9
Spindle pole body component.
    
 0.864
A0A0H2REA8
Histone-fold-containing protein.
    
 0.840
A0A0H2RF72
Histone H3; Belongs to the histone H3 family.
    
 0.840
A0A0H2S0S8
Histone H3; Belongs to the histone H3 family.
    
 0.840
Your Current Organism:
Schizopora paradoxa
NCBI taxonomy Id: 27342
Other names: Hyphodontia paradoxa, S. paradoxa
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