STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0H2S8U2WD40 repeat-like protein. (407 aa)    
Predicted Functional Partners:
A0A0H2S9I3
Small COPII coat GTPase; Belongs to the small GTPase superfamily. SAR1 family.
    
 0.998
A0A0H2RC17
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.934
SEY1
Protein SEY1; Cooperates with the reticulon proteins and tubule-shaping DP1 family proteins to generate and maintain the structure of the tubular endoplasmic reticulum network. Has GTPase activity, which is required for its function in ER organization; Belongs to the TRAFAC class dynamin-like GTPase superfamily. GB1/RHD3-type GTPase family. RHD3 subfamily.
    
   0.879
A0A0H2RN74
CPII coat sec24 protein.
   
 
 0.825
A0A0H2R9P7
Beta-sandwich domain of Sec23/24.
   
 0.821
A0A0H2SFV0
t-SNARE.
   
 
 0.760
A0A0H2RC04
GOLD domain-containing protein.
    
 0.755
A0A0H2RTC3
Uncharacterized protein.
   
 0.746
A0A0H2SFM6
Supernatant protein factor, C-terminal domain-containing protein.
     
 0.738
A0A0H2S3A6
Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.
     
 0.730
Your Current Organism:
Schizopora paradoxa
NCBI taxonomy Id: 27342
Other names: Hyphodontia paradoxa, S. paradoxa
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