STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0H2SJS4Dihydrodipicolinate synthetase; Belongs to the DapA family. (315 aa)    
Predicted Functional Partners:
A0A0H2RXR7
Glutamate-cysteine ligase catalytic subunit.
    
 0.872
A0A0H2S8L4
PLP-dependent transferase.
   
 
 0.829
A0A0H2S8S3
Aspartate aminotransferase.
   
 0.814
A0A0H2RKX4
Aspartate aminotransferase.
   
 0.804
A0A0H2S9D0
Malate synthase; Belongs to the malate synthase family.
   
 
 0.801
A0A0H2S7Y1
D-aspartate oxidase.
   
 
 0.799
A0A0H2RES2
D-isomer specific 2-hydroxyacid dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 0.796
A0A0H2RGY4
2-hydroxyacid dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 0.796
A0A0H2R2Y7
Uncharacterized protein.
 
      0.795
A0A0H2RFX4
Aldolase; Belongs to the DapA family.
  
  
 
0.793
Your Current Organism:
Schizopora paradoxa
NCBI taxonomy Id: 27342
Other names: Hyphodontia paradoxa, S. paradoxa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.