STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0H2SNJ9Phosphoserine aminotransferase. (424 aa)    
Predicted Functional Partners:
A0A0H2SIY1
D-3-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
 0.993
A0A0H2R287
D-lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 0.964
A0A0H2S042
D-isomer-specific 2-hydroxyacid dehydrogenase family protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 0.964
A0A0H2RHX0
Tryptophan synthase beta subunit-like PLP-dependent enzyme.
   
 0.923
A0A0H2S2D0
Histidine biosynthesis trifunctional protein.
  
  
 0.905
A0A0H2S8L4
PLP-dependent transferase.
    
 0.897
A0A0H2S465
PALP-domain-containing protein.
  
 
 0.831
A0A0H2S5U1
Cysteine synthase.
  
 
 0.831
A0A0H2RRL8
PDT-domain-containing protein.
  
  
 0.819
A0A0H2RFI0
Tryptophan synthase.
   
  
 0.806
Your Current Organism:
Schizopora paradoxa
NCBI taxonomy Id: 27342
Other names: Hyphodontia paradoxa, S. paradoxa
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