STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_914g1SH3 domain-containing protein. (284 aa)    
Predicted Functional Partners:
VP01_2141g2
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.876
VP01_2605g4
Arf-GAP domain-containing protein.
    
 0.853
VP01_1813g2
GTP-binding protein ypt3.
    
 0.845
VP01_432g16
Arf-GAP domain-containing protein.
    
 0.811
VP01_3021g1
Exocyst complex protein EXO70; Involved in the secretory pathway as part of the exocyst complex which tethers secretory vesicles to the sites of exocytosis. Also plays a role in the assembly of the exocyst. Belongs to the EXO70 family.
     
 0.788
VP01_3553g2
Arf-GAP domain-containing protein.
   
  0.768
VP01_4350g2
Ras-like protein Rab-8A.
    
 0.722
VP01_388g5
Uncharacterized protein.
    
 0.722
VP01_1202g3
Uncharacterized protein.
    
 0.722
VP01_1264g1
Uncharacterized protein.
     
 0.700
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
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