STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_899g6MC family mitochondrial carrier protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (363 aa)    
Predicted Functional Partners:
VP01_1577g1
Carnitine O-acetyltransferase; Belongs to the carnitine/choline acetyltransferase family.
   
  
 0.802
VP01_1179g3
MaoC-like domain-containing protein.
   
  
 0.752
VP01_1732g1
AMP-binding domain-containing protein.
    
 0.698
VP01_768g11
Uncharacterized protein; Belongs to the phosphohexose mutase family.
    
 0.683
VP01_936g2
Carn_acyltransf domain-containing protein.
   
 
 0.647
VP01_7725g1
Carn_acyltransf domain-containing protein.
   
 
 0.647
VP01_2601g1
Carn_acyltransf domain-containing protein.
   
 
 0.647
VP01_2474g3
Carn_acyltransf domain-containing protein.
   
 
 0.647
VP01_2243g1
Carn_acyltransf domain-containing protein.
   
 
 0.647
VP01_108g6
Carn_acyltransf domain-containing protein.
   
 
 0.647
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.