STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_81g2FAD-binding FR-type domain-containing protein. (823 aa)    
Predicted Functional Partners:
VP01_865g2
Uncharacterized protein.
   
 0.808
VP01_1566g13
Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.
    
 0.660
VP01_848g4
Uncharacterized protein.
    
 
 0.633
VP01_156g2
Calmodulin; Belongs to the calmodulin family.
    
 
 0.633
VP01_740g3
Uncharacterized protein.
   
 0.619
VP01_2483g4
Uncharacterized protein.
   
 0.619
VP01_15g15
Uncharacterized protein.
   
 0.559
VP01_638g3
DH domain-containing protein.
    
 0.557
VP01_407g1
TKL protein kinase.
    
 0.557
VP01_28g8
TKL/LISK/LISK-DD1 protein kinase.
    
 0.557
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
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