STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_779g6Uncharacterized protein. (387 aa)    
Predicted Functional Partners:
VP01_865g2
Uncharacterized protein.
    
 0.831
VP01_311g3
TEA domain-containing protein.
    
 0.686
VP01_3720g1
Uncharacterized protein.
   
  0.677
VP01_3389g1
Uncharacterized protein.
   
  0.677
VP01_1387g3
Non-specific serine/threonine protein kinase.
    
 0.675
VP01_573g9
Phosphotransferase.
    
 0.650
VP01_2620g3
Nucleoside diphosphate kinase.
    
 0.648
VP01_1642g3
Uncharacterized protein.
    
 0.643
VP01_346g11
BZIP domain-containing protein.
   
 0.633
VP01_1356g5
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
    
 0.627
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.