STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_8006g1Uncharacterized protein. (146 aa)    
Predicted Functional Partners:
VP01_941g10
Uncharacterized protein.
    
 0.766
VP01_656g5
SANT_DAMP1_like domain-containing protein.
    
 0.636
VP01_1732g3
Enhancer of polycomb-like protein.
    
 0.629
VP01_311g4
TAF domain-containing protein.
    
 0.595
VP01_211g4
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.564
VP01_210g19
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.564
VP01_124g4
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.564
VP01_1012g3
Uncharacterized protein.
    
 0.554
VP01_125g10
Uncharacterized protein.
    
 
 0.508
VP01_415g5
Uncharacterized protein; Belongs to the actin family.
    
 0.500
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.