STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_811g6Thioredoxin domain-containing protein. (657 aa)    
Predicted Functional Partners:
VP01_1191g4
Uncharacterized protein.
   
 0.950
VP01_1118g6
Uncharacterized protein.
    
 0.936
VP01_369g5
Thioredoxin domain-containing protein.
     
0.872
VP01_441g4
Peptide-methionine (S)-S-oxide reductase.
   
 0.870
VP01_458g3
Uncharacterized protein.
  
  
 
0.829
VP01_2544g3
Uncharacterized protein.
  
 0.829
VP01_1381g4
Peroxiredoxin (Alkyl hydroperoxide reductase subunit C).
  
 0.829
VP01_1507g4
Glucose-regulated protein; Belongs to the heat shock protein 70 family.
   
 0.823
gor
Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
   
 0.811
lpdA
Dihydrolipoyl dehydrogenase.
   
 0.808
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
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