STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
metXHomoserine O-acetyltransferase. (513 aa)    
Predicted Functional Partners:
VP01_663g4
Homoserine dehydrogenase.
   
 0.943
VP01_196g8
Uncharacterized protein.
   
 
 0.943
VP01_64g11
Uncharacterized protein.
   
 
 0.933
trpB-2
Tryptophan synthase.
  
 
 0.932
VP01_2189g6
Aminotran_5 domain-containing protein.
   
 0.923
ilvA
Threonine dehydratase.
   
 
 0.905
VP01_497g3
Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
   
 
 0.894
VP01_887g7
Cysteine synthase.
  
 0.879
trpB
Tryptophan synthase.
  
 
 0.873
acs
Acetyl-coenzyme A synthetase.
  
 0.857
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.