STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_797g2Uncharacterized protein. (1576 aa)    
Predicted Functional Partners:
VP01_277g5
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
   
 0.998
VP01_3383g5
ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.
    
 0.995
VP01_213g2
ADP-ribosylation factor 3; Belongs to the small GTPase superfamily. Arf family.
    
 0.995
VP01_138g5
Uncharacterized protein.
    
 0.995
VP01_2909g1
V-SNARE coiled-coil homology domain-containing protein.
     
 0.975
VP01_1939g8
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
 0.964
VP01_1914g5
Heat shock 70kDa protein 4.
    
 0.963
VP01_1507g4
Glucose-regulated protein; Belongs to the heat shock protein 70 family.
    
 0.954
VP01_589g4
Heat shock protein HSS1; Belongs to the heat shock protein 70 family.
    
 0.949
VP01_386g18
Uncharacterized protein; Belongs to the heat shock protein 70 family.
    
 0.949
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.