STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_66g10OTU domain-containing protein. (505 aa)    
Predicted Functional Partners:
VP01_2309g2
Cell division cycle protein 48.
   
 0.987
VP01_1449g5
Uncharacterized protein.
   
 
 0.969
VP01_1533g2
Uncharacterized protein.
    
 
 0.965
VP01_6g6
MPN domain-containing protein.
    
 
 0.964
VP01_2082g2
Uncharacterized protein.
   
 
 0.964
VP01_1488g6
Uncharacterized protein; Belongs to the AAA ATPase family.
   
 0.963
VP01_1908g1
U-box domain-containing protein.
    
 
 0.959
VP01_4g16
Uncharacterized protein.
    
 
 0.892
VP01_2244g1
Uncharacterized protein.
    
 
 0.892
VP01_720g9
Adenosinetriphosphatase; Belongs to the AAA ATPase family.
    
 0.889
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.