STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_634g3Response regulatory domain-containing protein. (525 aa)    
Predicted Functional Partners:
VP01_200g3
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.986
VP01_502g4
CMGC/GSK protein kinase; Belongs to the protein kinase superfamily.
    
 0.983
VP01_134g13
WD_REPEATS_REGION domain-containing protein.
   
 0.982
tuf-2
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 0.981
tef-1
Elongation factor 1 alpha.
   
 0.981
VP01_1061g6
Uncharacterized protein.
    
 0.981
VP01_2165g4
CS domain-containing protein.
   
 0.980
VP01_395g8
Uncharacterized protein.
    
 0.979
VP01_242g3
Hist_deacetyl domain-containing protein.
    
 0.979
VP01_2309g2
Cell division cycle protein 48.
    
 0.978
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.