STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_588g6Amidohydro-rel domain-containing protein. (178 aa)    
Predicted Functional Partners:
pyrD
Dihydroorotate dehydrogenase (Fumarate).
  
 0.977
VP01_142g17
Uncharacterized protein.
  
 
 0.944
VP01_302g5
Pribosyltran domain-containing protein.
  
 
 0.913
VP01_1041g6
Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family.
  
 
 0.913
VP01_915g6
Nitrate reductase (NADH).
  
 
 0.903
VP01_915g7
Nitrate reductase (NADH).
  
 
 0.903
VP01_454g4
Uncharacterized protein.
  
 
 0.903
VP01_2716g4
NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
  
 
 0.903
VP01_176g6
Uncharacterized protein.
  
 
 0.865
VP01_801g1
Carbamoyl-phosphate synthase small subunit.
  
 0.854
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.