STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_470g8Vacuolar sorting-associated protein 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (710 aa)    
Predicted Functional Partners:
VP01_1756g3
DH domain-containing protein.
    
 
 0.942
VP01_89g9
Uncharacterized protein.
    
 0.922
VP01_277g5
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
   
 0.914
VP01_4562g1
Mitochondrial fission 1 protein; Has a role in mitochondrial fission.
    
 0.911
VP01_283g1
PX domain-containing protein.
    
 0.888
VP01_797g2
Uncharacterized protein.
   
 0.863
VP01_385g2
BAR domain-containing protein.
    
 0.855
VP01_400g14
Uncharacterized protein.
    
 0.853
VP01_2095g1
Uncharacterized protein.
    
 0.847
VP01_1464g1
ATG11 domain-containing protein.
    
 0.797
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
Server load: low (18%) [HD]