STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_4655g2Uncharacterized protein. (128 aa)    
Predicted Functional Partners:
folE
GTP cyclohydrolase I.
  
 
 0.948
VP01_896g5
Dihydrofolate reductase; Belongs to the dihydrofolate reductase family.
  
 
 0.905
VP01_1549g6
Folylpolyglutamate synthase; Catalyzes conversion of folates to polyglutamate derivatives allowing concentration of folate compounds in the cell and the intracellular retention of these cofactors, which are important substrates for most of the folate-dependent enzymes that are involved in one-carbon transfer reactions involved in purine, pyrimidine and amino acid synthesis; Belongs to the folylpolyglutamate synthase family.
  
 
 0.894
VP01_1424g4
Dihydrofolate synthetase; Belongs to the folylpolyglutamate synthase family.
  
 
 0.854
VP01_1037g5
Glutamine amidotransferase type-1 domain-containing protein.
  
 
 0.806
VP01_2145g1
Uncharacterized protein.
    
 0.790
VP01_829g1
Anthranilate synthase component I.
  
 
 0.778
VP01_3859g3
Uncharacterized protein.
  
 
 0.778
VP01_487g1
Branched-chain-amino-acid aminotransferase.
  
 
 0.777
VP01_3503g1
Branched-chain-amino-acid aminotransferase.
  
 
 0.777
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.