STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_436g8Importin subunit alpha; Belongs to the importin alpha family. (562 aa)    
Predicted Functional Partners:
VP01_491g3
Importin N-terminal domain-containing protein.
   
 0.978
VP01_1349g3
Uncharacterized protein.
   
 0.978
VP01_762g6
Nuclear cap-binding protein subunit 2.
    
 
 0.976
VP01_1065g11
Uncharacterized protein.
   
 
 0.970
VP01_275g7
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 
 0.949
VP01_819g2
Uncharacterized protein.
   
 
 0.946
VP01_5349g2
Uncharacterized protein.
    
 
 0.945
VP01_3947g1
Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family.
    
   0.933
VP01_52g1
CAS_CSE1 domain-containing protein.
   
 0.932
VP01_52g4
CAS_CSE1 domain-containing protein.
   
 0.932
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
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