STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_3984g1Stress response protein NST1; May act as a negative regulator of salt tolerance. Belongs to the NST1 family. (309 aa)    
Predicted Functional Partners:
VP01_865g2
Uncharacterized protein.
    
 0.905
VP01_3022g2
WD_REPEATS_REGION domain-containing protein.
   
 0.826
VP01_467g3
Ipi1_N domain-containing protein.
   
 0.790
VP01_848g4
Uncharacterized protein.
    
 0.761
VP01_156g2
Calmodulin; Belongs to the calmodulin family.
    
 0.761
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.720
VP01_7g24
Uncharacterized protein.
    
 0.659
VP01_2480g5
Uncharacterized protein.
    
 0.659
VP01_507g8
Uncharacterized protein.
    
 0.641
VP01_418g4
40S ribosomal protein S14a; Belongs to the universal ribosomal protein uS11 family.
    
  0.641
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.