STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_375g6Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy. (184 aa)    
Predicted Functional Partners:
VP01_3028g4
Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation.
   
 0.999
VP01_281g8
E1-like protein-activating enzyme G.
    
 0.998
VP01_1545g3
Autophagy-related protein 3.
    
 0.998
VP01_3326g5
ATG16 domain-containing protein.
    
 0.992
VP01_2823g3
ULK/ULK protein kinase.
    
 
 0.966
VP01_2300g4
Uncharacterized protein.
    
 0.963
VP01_3101g2
Autophagy-related protein.
   
 0.962
VP01_111g13
Lipase_3 domain-containing protein.
   
 
 0.962
VP01_256g4
Autophagy_act_C domain-containing protein.
    
 0.937
VP01_2823g5
ULK/ULK protein kinase.
    
 
 0.927
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.