STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_3376g3Uncharacterized protein. (222 aa)    
Predicted Functional Partners:
VP01_3240g1
Uncharacterized protein.
    
 0.884
VP01_2824g6
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX.
  
 0.867
VP01_2100g1
Uncharacterized protein.
    
 0.865
VP01_1433g1
Uncharacterized protein.
  
 0.847
VP01_1643g2
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.
  
 
 0.827
VP01_412g11
Inosine triphosphate pyrophosphatase.
   
 
 0.799
VP01_1476g8
Inorganic pyrophosphatase.
     
 0.772
VP01_197g6
Uncharacterized protein.
     
 0.762
VP01_2620g3
Nucleoside diphosphate kinase.
   
 
 0.757
VP01_3157g3
Uncharacterized protein.
     
 0.747
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
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