STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_2868g4Uncharacterized protein. (601 aa)    
Predicted Functional Partners:
VP01_476g1
Uncharacterized protein.
    
 0.871
VP01_1891g3
Profilin; Belongs to the profilin family.
    
 0.847
VP01_2588g2
Uncharacterized protein.
    
 0.685
VP01_498g3
Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.
    
 0.678
VP01_101g3
Actin-like protein 3; Belongs to the actin family.
    
 0.678
VP01_7709g1
Uncharacterized protein.
    
 0.669
VP01_719g1
Rho family protein.
    
 0.669
VP01_670g6
Uncharacterized protein.
    
 0.669
VP01_66g8
Uncharacterized protein.
    
 0.669
VP01_5641g1
Uncharacterized protein.
    
 0.669
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.