STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_2796g2Uncharacterized protein. (356 aa)    
Predicted Functional Partners:
VP01_807g5
Uncharacterized protein.
    
 0.967
VP01_3426g2
Phosphatidylinositol glycan, class A.
   
 0.958
VP01_3085g1
Phosphatidylinositol glycan, class A.
   
 0.958
VP01_3136g2
Uncharacterized protein.
     
 0.945
VP01_1099g6
PIG-P domain-containing protein.
    
 0.932
VP01_96g7
Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.895
VP01_3426g1
Uncharacterized protein.
   
 0.893
VP01_303g5
Uncharacterized protein.
     
 0.878
VP01_720g5
Uncharacterized protein.
    
 0.805
VP01_93g8
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
    
 0.802
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.