STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_2771g2Guanine nucleotide-binding protein subunit alpha. (367 aa)    
Predicted Functional Partners:
VP01_197g6
Uncharacterized protein.
   
 0.977
VP01_700g7
Guanine nucleotide-binding protein subunit beta.
   
 0.951
VP01_1954g2
RGS domain-containing protein.
   
 0.938
VP01_575g5
Guanine nucleotide binding (G protein), alpha.
  
  
 
0.887
VP01_2189g5
Ubiquitin carboxyl-terminal hydrolase.
    
 0.882
VP01_839g3
Uncharacterized protein.
    
 0.844
VP01_762g4
Uncharacterized protein.
    
 0.844
VP01_1288g12
Guanine nucleotide-binding protein alpha-3 subunit.
  
  
 
0.836
VP01_53g3
Uncharacterized protein.
    
 0.798
VP01_2279g1
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
 0.754
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.