STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_2638g2Uncharacterized protein; Belongs to the cytochrome P450 family. (574 aa)    
Predicted Functional Partners:
VP01_1719g7
S5A_REDUCTASE domain-containing protein.
    
 0.843
VP01_1719g3
Uncharacterized protein.
    
 0.843
VP01_264g7
Methylsterol monooxygenase; Belongs to the sterol desaturase family.
   
 0.835
VP01_199g13
Uncharacterized protein.
    
 0.818
VP01_242g8
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
    
 0.817
VP01_1138g1
Cytochrome c oxidase subunit XV assembly protein.
  
 0.808
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.780
VP01_475g9
Delta24(24(1))-sterol reductase.
    
 0.778
VP01_475g8
Uncharacterized protein.
    
 0.778
VP01_359g4
SE domain-containing protein.
   
 0.775
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.