STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_256g5Ras family protein. (185 aa)    
Predicted Functional Partners:
VP01_865g2
Uncharacterized protein.
   
 0.996
VP01_197g6
Uncharacterized protein.
    
 0.980
VP01_476g1
Uncharacterized protein.
    
 0.977
VP01_1756g3
DH domain-containing protein.
    
 0.973
VP01_218g14
Ras-GAP domain-containing protein.
    
 0.937
VP01_1694g10
Uncharacterized protein.
  
  
 
0.926
VP01_1348g5
Ras-GEF domain-containing protein.
    
 0.918
VP01_812g1
Uncharacterized protein.
   
 0.915
VP01_1232g2
Uncharacterized protein.
   
 0.915
VP01_668g3
Ras-GAP domain-containing protein.
    
 0.912
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.