STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_2566g1Cytochrome P450 67. (322 aa)    
Predicted Functional Partners:
VP01_1138g1
Cytochrome c oxidase subunit XV assembly protein.
  
 0.808
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.780
VP01_488g4
L-aminoadipate-semialdehyde dehydrogenase.
   
 0.733
VP01_2220g2
Uncharacterized protein.
   
 0.733
trpB
Tryptophan synthase.
    
 0.705
trpB-2
Tryptophan synthase.
    
 0.705
VP01_2139g3
Uncharacterized protein.
   
 0.695
VP01_141g2
Uncharacterized protein.
   
 0.695
VP01_1616g1
Uncharacterized protein.
     
 0.683
VP01_135g8
Methyltransf_2 domain-containing protein.
     
 0.683
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.