STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_2416g7Uncharacterized protein. (156 aa)    
Predicted Functional Partners:
VP01_275g7
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.852
VP01_918g3
GTP-binding protein ypt1.
    
 
 0.703
VP01_436g8
Importin subunit alpha; Belongs to the importin alpha family.
    
 
 0.700
VP01_1011g10
DPH-type MB domain-containing protein.
    
 
 0.659
VP01_490g2
Cullin 1; Belongs to the cullin family.
    
 0.658
VP01_23g4
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.658
VP01_403g4
Uncharacterized protein.
    
  0.589
VP01_3143g7
Uncharacterized protein.
    
 
 0.567
VP01_201g8
Uncharacterized protein.
    
 
 0.567
VP01_1947g6
Uncharacterized protein.
    
 
 0.567
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
Server load: low (18%) [HD]