STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_2584g3Cytochrome c oxidase subunit XI assembly protein. (271 aa)    
Predicted Functional Partners:
cyoE
Protoheme IX farnesyltransferase.
  
 0.994
VP01_1400g6
Uncharacterized protein.
  
 0.983
VP01_763g3
SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.
  
 
 0.945
VP01_359g9
Uncharacterized protein.
   
 
 0.945
VP01_327g5
Uncharacterized protein; Belongs to the cytochrome c oxidase subunit 6A family.
     
 0.929
VP01_2233g4
Uncharacterized protein.
     
 0.928
VP01_2904g2
Uncharacterized protein.
   
 
 0.924
VP01_198g1
Uncharacterized protein.
    
 0.913
rplX
Ribosomal protein L24.
 
 
   0.912
VP01_216g4
PUM-HD domain-containing protein.
    
   0.907
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.