STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_2298g2Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family. (185 aa)    
Predicted Functional Partners:
VP01_111g13
Lipase_3 domain-containing protein.
    
   0.933
VP01_915g6
Nitrate reductase (NADH).
   
 0.877
VP01_915g7
Nitrate reductase (NADH).
   
 0.877
VP01_2716g4
NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
   
 0.788
VP01_1447g6
NADPH--cytochrome P450 reductase; This enzyme is required for electron transfer from NADP to cytochrome P450 in microsomes. It can also provide electron transfer to heme oxygenase and cytochrome B5. Involved in ergosterol biosynthesis. In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
    
 0.774
VP01_1550g5
TPR_REGION domain-containing protein.
    
 0.731
VP01_1624g4
FA_desaturase domain-containing protein; Belongs to the fatty acid desaturase type 1 family.
    
 0.724
CYP51
Eburicol 14 alpha-demethylase; Belongs to the cytochrome P450 family.
   
 0.721
VP01_1179g3
MaoC-like domain-containing protein.
   
  
 0.633
VP01_1338g2
Elongation of fatty acids protein.
    
 0.632
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
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