STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_222g5Uncharacterized protein. (781 aa)    
Predicted Functional Partners:
VP01_599g9
WD_REPEATS_REGION domain-containing protein.
   
 0.994
VP01_3355g4
WD_REPEATS_REGION domain-containing protein.
    
   0.978
VP01_1430g3
Uncharacterized protein.
    
   0.977
VP01_770g2
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
  0.970
VP01_4514g1
Uncharacterized protein.
    
 0.968
VP01_137g3
Uncharacterized protein.
    
 0.964
VP01_946g2
Pre-mRNA-processing-splicing factor 8.
    
 
 0.946
VP01_348g11
RRM domain-containing protein.
    
  0.933
VP01_361g12
Uncharacterized protein.
    
 
 0.932
VP01_1066g4
Uncharacterized protein.
    
 
 0.924
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.