STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_2165g2Uncharacterized protein. (376 aa)    
Predicted Functional Partners:
VP01_1914g5
Heat shock 70kDa protein 4.
   
 0.830
VP01_2800g2
Uncharacterized protein; Belongs to the GrpE family.
  
 
 0.772
VP01_2064g1
Uncharacterized protein.
   
 0.755
dnaK
Chaperone protein DnaK; Belongs to the heat shock protein 70 family.
   
 0.755
VP01_1507g4
Glucose-regulated protein; Belongs to the heat shock protein 70 family.
   
 0.754
VP01_589g4
Heat shock protein HSS1; Belongs to the heat shock protein 70 family.
   
 0.734
VP01_386g18
Uncharacterized protein; Belongs to the heat shock protein 70 family.
   
 0.734
VP01_29g6
SH3 domain-containing protein.
   
 0.734
VP01_201g7
SH3 domain-containing protein.
   
 0.734
VP01_1516g2
Uncharacterized protein; Belongs to the heat shock protein 70 family.
   
 0.734
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.