STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_196g2Peptide hydrolase; Belongs to the peptidase M28 family. (454 aa)    
Predicted Functional Partners:
VP01_285g3
Uncharacterized protein.
     
 0.712
VP01_3044g2
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
     
 0.704
VP01_1006g2
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
     
 0.691
VP01_797g2
Uncharacterized protein.
    
 0.685
VP01_1798g1
Sortilin; Functions as a sorting receptor in the Golgi compartment required for the intracellular sorting and delivery of soluble vacuolar proteins, like carboxypeptidase Y (CPY) and proteinase A.
     
 0.664
VP01_434g5
CYTOSOL_AP domain-containing protein.
     
 0.662
VP01_823g3
Phospholipase.
    
 0.654
VP01_2055g1
PLD phosphodiesterase domain-containing protein.
    
 0.654
VP01_2664g4
FAD-binding PCMH-type domain-containing protein; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.
  
 0.653
VP01_464g2
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
   
 
  0.649
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.