STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_1834g2Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family. (511 aa)    
Predicted Functional Partners:
VP01_3584g1
Rieske domain-containing protein.
  
 
 0.844
VP01_750g2
NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.826
VP01_2118g2
Amidophosphoribosyltransferase.
    
 0.825
VP01_135g11
Glutamate-5-semialdehyde dehydrogenase.
    
 0.824
VP01_639g4
NADPH:adrenodoxin oxidoreductase, mitochondrial.
  
 
 0.823
VP01_1643g2
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.
  
 0.822
glmS
Glutamine-fructose-6-phosphate transaminase (Isomerizing).
  
 
 0.816
lpdA
Dihydrolipoyl dehydrogenase.
  
 
 0.814
VP01_3379g2
DAO domain-containing protein.
  
 
 0.808
gcvT
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
    
 0.801
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
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