STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_178g5HTH APSES-type domain-containing protein. (435 aa)    
Predicted Functional Partners:
tpiA
Triosephosphate isomerase.
  
 
 0.946
VP01_595g7
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 0.943
VP01_595g1
Glucose-6-phosphate isomerase.
  
 0.943
eno
Phosphopyruvate hydratase.
  
 
 0.911
VP01_2497g2
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
 
 0.905
VP01_835g2
TPR_REGION domain-containing protein.
  
 
 0.892
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.890
VP01_571g4
Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
  
 
 0.868
VP01_872g8
Glyco_hydro_15 domain-containing protein.
  
 0.845
VP01_2895g2
Glyco_hydro_15 domain-containing protein.
  
 0.845
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.