STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_1642g1Uncharacterized protein. (197 aa)    
Predicted Functional Partners:
VP01_1760g4
Uncharacterized protein.
   
 0.915
VP01_1837g2
Guanylate kinase.
    
 
 0.683
VP01_4219g2
TLC domain-containing protein.
    
 
 0.674
VP01_740g3
Uncharacterized protein.
    
   0.645
VP01_2483g4
Uncharacterized protein.
    
   0.645
VP01_529g1
Myotubularin phosphatase domain-containing protein.
    
   0.636
VP01_2234g4
Uncharacterized protein.
    
   0.636
VP01_44g6
GRIP domain-containing protein.
    
 
 0.632
VP01_436g8
Importin subunit alpha; Belongs to the importin alpha family.
    
 
 0.605
ADK1
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism. Adenylate kinase activity is critical for regulation of the phosphate utilization and the AMP de novo biosynthesis pathways.
    
 
 0.598
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
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