STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_15g15Uncharacterized protein. (442 aa)    
Predicted Functional Partners:
VP01_848g4
Uncharacterized protein.
   
 0.811
VP01_156g2
Calmodulin; Belongs to the calmodulin family.
   
 0.811
VP01_1073g4
Uncharacterized protein; Belongs to the multicopper oxidase family.
  
 
 0.773
VP01_2480g5
Uncharacterized protein.
   
 0.714
VP01_1219g1
Uncharacterized protein.
   
 0.711
VP01_791g5
EF-hand domain-containing protein.
   
 0.696
VP01_791g3
EF-hand domain-containing protein.
   
 0.696
MMM1
Maintenance of mitochondrial morphology protein 1; Component of the ERMES/MDM complex, which serves as a molecular tether to connect the endoplasmic reticulum (ER) and mitochondria. Components of this complex are involved in the control of mitochondrial shape and protein biogenesis, and function in nonvesicular lipid trafficking between the ER and mitochondria. The MDM12-MMM1 subcomplex functions in the major beta-barrel assembly pathway that is responsible for biogenesis of all outer membrane beta- barrel proteins, and acts in a late step after the SAM complex. The MDM10-MDM12-MMM1 su [...]
    
 0.683
VP01_71g12
Calcium-binding protein NCS-1.
   
 0.675
VP01_634g3
Response regulatory domain-containing protein.
    
 0.639
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.