STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_1291g5VWFA domain-containing protein. (507 aa)    
Predicted Functional Partners:
VP01_764g4
Uncharacterized protein.
  
 
 0.699
VP01_465g3
Abhydrolase_3 domain-containing protein.
  
 
 0.699
VP01_1060g1
Abhydrolase_3 domain-containing protein.
  
 
 0.699
VP01_3431g2
Uncharacterized protein.
   
   0.639
atpD
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
   0.633
VP01_487g2
Mitochondrial Rho GTPase.
 
  
 
 0.630
VP01_848g4
Uncharacterized protein.
    
 
 0.628
VP01_156g2
Calmodulin; Belongs to the calmodulin family.
    
 
 0.628
VP01_70g10
Cellulase domain-containing protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
 0.593
VP01_517g1
Uncharacterized protein.
   
 0.593
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.