STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_122g5Uncharacterized protein; Belongs to the aldehyde dehydrogenase family. (978 aa)    
Predicted Functional Partners:
acs
Acetyl-coenzyme A synthetase.
  
 0.916
VP01_2061g5
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.914
mmsA
Methylmalonate-semialdehyde dehydrogenase (Acylating).
   
0.888
VP01_2248g4
S-(Hydroxymethyl)glutathione dehydrogenase/alcohol dehydrogenase.
  
 0.886
VP01_531g11
Uncharacterized protein.
  
 
 0.883
VP01_463g6
FAA_hydrolase domain-containing protein.
  
 0.879
VP01_1732g2
3-hydroxyacyl-CoA dehydrogenase.
  
 0.862
VP01_1616g1
Uncharacterized protein.
     
 0.860
VP01_135g8
Methyltransf_2 domain-containing protein.
     
 0.860
VP01_3035g2
Uncharacterized protein.
    
 0.854
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.