STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_1221g1Uncharacterized protein. (708 aa)    
Predicted Functional Partners:
VP01_321g3
Flavoprotein domain-containing protein.
  
 0.984
VP01_896g5
Dihydrofolate reductase; Belongs to the dihydrofolate reductase family.
  
 0.965
VP01_2072g2
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
 
 0.939
thyA
Thymidylate synthase.
  
 0.920
VP01_349g14
Replication factor C subunit 3/5.
   
 
 0.905
pcn
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
  
 0.895
VP01_894g4
Mif2_N domain-containing protein.
    
 0.840
VP01_201g5
Uncharacterized protein.
   
 0.830
VP01_2736g6
Thymidylate kinase.
  
 
 0.822
VP01_412g11
Inosine triphosphate pyrophosphatase.
  
 0.819
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
Server load: low (28%) [HD]