STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_119g15Glucose 1-dehydrogenase. (126 aa)    
Predicted Functional Partners:
VP01_729g7
PKS_AT domain-containing protein.
  
 0.746
VP01_2867g1
NADH dehydrogenase (Ubiquinone) Fe-S protein 8.
    
 0.731
VP01_1138g1
Cytochrome c oxidase subunit XV assembly protein.
   
 0.672
VP01_896g5
Dihydrofolate reductase; Belongs to the dihydrofolate reductase family.
   
 
 0.650
VP01_1179g3
MaoC-like domain-containing protein.
   
 0.625
VP01_123g5
Acyl-CoA dehydrogenase.
   
 0.624
VP01_727g1
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.614
VP01_358g4
Acyl-coenzyme A oxidase.
   
 0.614
VP01_709g4
VPS13_mid_rpt domain-containing protein; Belongs to the fatty acid desaturase type 1 family.
   
 0.613
VP01_595g9
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
   
 0.613
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.