STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_1138g2alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (764 aa)    
Predicted Functional Partners:
VP01_2416g6
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
  
  
0.869
VP01_2489g1
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
  
  
0.633
VP01_1655g4
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
  
  
0.585
VP01_4024g2
Uncharacterized protein.
  
  
0.572
VP01_791g2
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
  
  
 
0.556
VP01_536g1
Uncharacterized protein.
  
  
 
0.531
VP01_984g6
Uncharacterized protein.
     
 0.481
VP01_4826g2
Uncharacterized protein.
     
 0.481
VP01_4667g2
Uncharacterized protein.
     
 0.481
VP01_3859g2
Uncharacterized protein.
     
 0.481
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.