STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_1017g3Melibiase_C domain-containing protein; Belongs to the glycosyl hydrolase 27 family. (617 aa)    
Predicted Functional Partners:
VP01_3230g4
Alpha-galactosidase.
  
  
  0.761
VP01_2547g1
Melibiase_C domain-containing protein; Belongs to the glycosyl hydrolase 27 family.
  
  
  0.646
VP01_1397g1
Uncharacterized protein; Belongs to the glycosyl hydrolase 31 family.
     
 0.626
VP01_1433g2
Melibiase_C domain-containing protein; Belongs to the glycosyl hydrolase 27 family.
  
  
  0.594
VP01_57g5
Uncharacterized protein.
     
 0.587
VP01_1382g2
Uncharacterized protein.
     
 0.587
VP01_3990g1
Beta-hexosaminidase.
   
 
 0.586
VP01_3323g1
Beta-hexosaminidase.
   
 
 0.586
VP01_1268g1
Uncharacterized protein.
     
 0.574
VP01_504g7
Uncharacterized protein; Belongs to the glycosyl hydrolase 32 family.
     
 0.562
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.